dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01032
Location and strand information: 20497 - 22821 (+)
Family: 2.A.21.9.2
Protein type: TC
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01033
Location and strand information: 22840 - 24063 (-)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 4.958
Protein molecular weight: 46473.85
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01034
Location and strand information: 24077 - 25726 (-)
Family: GH43_10|GH43
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 6.3041
Protein molecular weight: 62184.65
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01035
Location and strand information: 25872 - 27815 (-)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 6.1456
Protein molecular weight: 74046.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01036
Location and strand information: 27877 - 28968 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01037
Location and strand information: 28971 - 30896 (-)
Family: GH146
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3308
Protein molecular weight: 73161.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01038
Location and strand information: 31376 - 33520 (-)
Family: PL0|PL39
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.2165
Protein molecular weight: 81722.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01039
Location and strand information: 33576 - 35174 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01040
Location and strand information: 35403 - 38237 (+)
Family: HTH_AraC
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01041
Location and strand information: 38439 - 39659 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 6.2319
Protein molecular weight: 46175.3
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01042
Location and strand information: 39683 - 40228 (+)
Family: GerE
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01043
Location and strand information: 40356 - 43424 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01044
Location and strand information: 43438 - 45252 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01045
Location and strand information: 45426 - 45524 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01046
Location and strand information: 45713 - 48910 (-)
Family: GH2
Protein type: CAZyme
Protein description: Evolved beta-galactosidase subunit alpha
Protein isoelectric point: 6.9
Protein molecular weight: 123781.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01047
Location and strand information: 49044 - 50555 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9136
Protein molecular weight: 55883.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01048
Location and strand information: 50578 - 52509 (+)
Family: GH97
Protein type: CAZyme
Protein description: Retaining alpha-galactosidase
Protein isoelectric point: 7.7115
Protein molecular weight: 73140.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01049
Location and strand information: 52509 - 54170 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01050
Location and strand information: 54192 - 56555 (-)
Family: GH28
Protein type: CAZyme
Protein description: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
Protein isoelectric point: 6.7465
Protein molecular weight: 87511.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01051
Location and strand information: 56568 - 58181 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01052
Location and strand information: 58369 - 59811 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01053
Location and strand information: 59905 - 61290 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8422
Protein molecular weight: 51990.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01054
Location and strand information: 61383 - 64457 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.7758
Protein molecular weight: 118197.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01055
Location and strand information: 64541 - 66994 (-)
Family: GH51
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.2158
Protein molecular weight: 92692.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002455_4|CGC1
Gene ID: MGYG000002455_01056
Location and strand information: 67014 - 70376 (-)
Family: GH43_9|GH43_34|GH43|GH43_19
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.6752
Protein molecular weight: 128906.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002455_01033	GH88_e24
MGYG000002455_01034	GH43_e184\|3.2.1.55	xylan
MGYG000002455_01035	GH97_e17
MGYG000002455_01037	GH146_e10\|3.2.1.185	arabinan
MGYG000002455_01038	PL0_e12
MGYG000002455_01041	GH88_e24
MGYG000002455_01046	GH2_e2\|3.2.1.23	beta-galactan
MGYG000002455_01047	GH28_e94
MGYG000002455_01048	GH97_e17
MGYG000002455_01050	GH28_e39
MGYG000002455_01053	GH28_e66
MGYG000002455_01054	GH2_e99\|3.2.1.23	beta-galactan
MGYG000002455_01055
MGYG000002455_01056	GH43_e71

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is beta-galactan

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002455_01032	Sensor histidine kinase RcsC	TC	20497	22821	+	2.A.21.9.2
MGYG000002455_01033	Unsaturated chondroitin disaccharide hydrolase	CAZyme	22840	24063	-	GH88
MGYG000002455_01034	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	24077	25726	-	GH43_10\| GH43
MGYG000002455_01035	Retaining alpha-galactosidase	CAZyme	25872	27815	-	GH97
MGYG000002455_01036	hypothetical protein	null	27877	28968	-	Beta-lactamase
MGYG000002455_01037	hypothetical protein	CAZyme	28971	30896	-	GH146
MGYG000002455_01038	hypothetical protein	CAZyme	31376	33520	-	PL0\| PL39
MGYG000002455_01039	hypothetical protein	null	33576	35174	-	Alginate_lyase
MGYG000002455_01040	hypothetical protein	TF	35403	38237	+	HTH_AraC
MGYG000002455_01041	Unsaturated chondroitin disaccharide hydrolase	CAZyme	38439	39659	+	GH88
MGYG000002455_01042	hypothetical protein	TF	39683	40228	+	GerE
MGYG000002455_01043	TonB-dependent receptor SusC	TC	40356	43424	+	1.B.14.6.1
MGYG000002455_01044	hypothetical protein	null	43438	45252	+	SusD-like_3\| SusD_RagB
MGYG000002455_01045	hypothetical protein	null	45426	45524	+	No domain
MGYG000002455_01046	Evolved beta-galactosidase subunit alpha	CAZyme	45713	48910	-	GH2
MGYG000002455_01047	hypothetical protein	CAZyme	49044	50555	+	GH28
MGYG000002455_01048	Retaining alpha-galactosidase	CAZyme	50578	52509	+	GH97
MGYG000002455_01049	hypothetical protein	null	52509	54170	+	No domain
MGYG000002455_01050	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	CAZyme	54192	56555	-	GH28
MGYG000002455_01051	hypothetical protein	null	56568	58181	-	No domain
MGYG000002455_01052	hypothetical protein	null	58369	59811	-	Redoxin
MGYG000002455_01053	hypothetical protein	CAZyme	59905	61290	-	GH28
MGYG000002455_01054	Beta-galactosidase	CAZyme	61383	64457	-	GH2
MGYG000002455_01055	hypothetical protein	CAZyme	64541	66994	-	GH51
MGYG000002455_01056	hypothetical protein	CAZyme	67014	70376	-	GH43_9\| GH43_34\| GH43\| GH43_19
Protein ID	Protein Name	Type	Start	End	Strand	Signature